plotclust {biclust} | R Documentation

## Barplot of Bicluster

### Description

Draws a graph to compare the values inside the diffrent biclusters with the values outside the bicluster

### Usage

    plotclust(res,x,bicluster=TRUE,legende=FALSE,noC=5,wyld=3,Titel="Plotclust",...)

### Arguments

`x` | The data matrix
`res` | BiclustResult object if bicluster=TRUE else a normal kcca object.
`bicluster` | If TRUE,res is treated as a BiclustResult object
`legende` | Draws a legend.
`noC` | Number of Clusters drawn
`wyld` | Gives the distance between plot and axis.
`Titel` | Gives the title of the plot.
`...` | Additional plot options

### Author(s)

Sebastian Kaiser sebastian.kaiser@stat.uni-muenchen.de

### See Also

`bubbleplot` for simultaneous representation of biclusters. `parallelCoordinates`for single representation of biclusters as lines of gene or condition profiles. `drawHeatmap`for Heatmap representation of biclusters.

### Examples

      s2=matrix(rnorm(400),20,20)
      s2[12:16,12:16]=rnorm(25,3,0.3)
      set.seed(1)
      bics <- biclust(s2,BCPlaid(), back.fit = 2, shuffle = 3, fit.model = ~m + a + b,
      iter.startup = 5, iter.layer = 30,  verbose = TRUE)
      plotclust(bics,s2)

[Package biclust version 0.8.1 Index]