BCQuest               package:biclust               R Documentation

_T_h_e _Q_u_e_s_t_m_o_t_i_f _B_i_c_l_u_s_t_e_r _a_l_g_o_r_i_t_h_m

_D_e_s_c_r_i_p_t_i_o_n:

     Performs Questmotif Biclustering a Bicluster algorithm for
     questionairs based on the framework by Murali and Kasif (2003).
     Searches subgroups of questionairs with same or similar answer to
     some questions.

_U_s_a_g_e:

     ## S4 method for signature 'matrix, BCQuest':
     biclust(x, method=BCQuest(), ns=10, nd=10, sd=5, alpha=0.05, number=100)

_A_r_g_u_m_e_n_t_s:

       x: Data Matrix.

  method: Here BCQuest, to perform Questmotif algorithm

      ns: Number of questions choosen.

      nd: Number of repetitions.

      sd: Sample size in repetitions.

   alpha: Scaling factor for column result.

  number: Number of bicluster to be found.

_V_a_l_u_e:

     Returns an object of class 'Biclust'.

_E_x_t_e_n_d_s:

     Class '"BiclustMethod"', directly.

_A_u_t_h_o_r(_s):

     Sebastian Kaiser  sebastian.kaiser@stat.uni-muenchen.de

_R_e_f_e_r_e_n_c_e_s:

     Murali, T. & Kasif, S.  Extracting Conserved Gene Expression
     Motifs from Gene Expression Data  Pacific Symposium on
     Biocomputing, sullivan.bu.edu,  2003, 8, 77-88

_S_e_e _A_l_s_o:

     'biclust', 'Biclust'

