writeBiclusterResults        package:biclust        R Documentation

_w_r_i_t_e_B_i_c_l_u_s_t_e_r_R_e_s_u_l_t_s

_D_e_s_c_r_i_p_t_i_o_n:

     Write bicluster results to a file

_U_s_a_g_e:

     writeBiclusterResults(fileName, bicResult, bicName, geneNames, arrayNames, append=FALSE, delimiter=" ")

_A_r_g_u_m_e_n_t_s:

fileName: Path to the file were biclusters are written.

bicResult: Biclusters results as a Biclust class.

 bicName: Brief description for the biclustering algorithm used.

geneNames: Array of strings with gene (row) names in the analyzed data
          matrix

arrayNames: Array of strings with condition (column) names in the
          analyzed data matrix

  append: If true, adds the bicluster results to previous information
          in the text file, if it exists. Default false.

delimiter: delimiter string between gene and condition names. Default "
          ".

_A_u_t_h_o_r(_s):

     Rodrigo Santamaria rodri@usal.es

_E_x_a_m_p_l_e_s:

       data(BicatYeast)
       res <- biclust(BicatYeast, method=BCCC(), delta=1.5,  alpha=1, number=10)
       writeBiclusterResults("results.txt", res,"CC with delta 1.5", dimnames(BicatYeast)[1][[1]],dimnames(BicatYeast)[2][[1]])
       

