# Factor Analysis for Biclustering with Sparse Factors and Loadings

## Documentation for package ‘fabia’ version 0.1.1

## User Guides and Package Vignettes

Read overview or browse directory.

## Help Pages

Breast_A | Subclasses of van't Veer breast cancer microarray data set
CBreast | Subclasses of van't Veer breast cancer microarray data set
CDLBCL | Microarray data set of Rosenwald diffuse large-B-cell lymphoma
CMulti | Microarray data set of Su on different mammalian tissue types
DLBCL_B | Microarray data set of Rosenwald diffuse large-B-cell lymphoma
extract_bic | Extraction of Biclusters
extract_plot | Extraction of Biclusters and Plotting of the Results
fabi | Factor Analysis for Bicluster Acquisition: Laplace Prior (FABI)
fabia | Factor Analysis for Bicluster Acquisition: Laplace Prior (FABIA)
fabiaDemo | Demos for fabia
fabiap | Factor Analysis for Bicluster Acquisition: Post-Projection (FABIAP)
fabias | Factor Analysis for Bicluster Acquisition: Sparseness Projection (FABIAS)
fabiasp | Factor Analysis for Bicluster Acquisition: Sparseness Projection (FABIASP)
fabiaVersion | Display version info for package and for FABIA
make_fabi_data | Generation of Bicluster Data
make_fabi_data_blocks | Generation of Bicluster Data with Bicluster Blocks
make_fabi_data_blocks_pos | Generation of Bicluster Data with Bicluster Blocks
make_fabi_data_pos | Generation of Bicluster Data
mfsc | Sparse Matrix Factorization for Bicluster Analysis (MFSC)
Multi_A | Microarray data set of Su on different mammalian tissue types
myImagePlot | Plotting of a Matrix
nmfdiv | Non-negative Matrix Factorization: Kullaback-Leibler Divergence
nmfeu | Non-negative Matrix Factorization: Euclidean Distance
nmfsc | Non-negative Sparse Matrix Factorization
nprojfunc | Projection of a Vector to a Non-negative Sparse Vector
PlotBicluster | Plotting of a bicluster
projfunc | Projection of a Vector to a Sparse Vector
XBreast | Subclasses of van't Veer breast cancer microarray data set
XDLBCL | Microarray data set of Rosenwald diffuse large-B-cell lymphoma
XMulti | Microarray data set of Su on different mammalian tissue types